10.6084/m9.figshare.7659701.v1
Mohammad Zia
Mohammad
Zia
Paul Spurgeon
Paul
Spurgeon
Adrian Levesque
Adrian
Levesque
Thomas Furlani
Thomas
Furlani
Jianxin Wang
Jianxin
Wang
Additional file 5: of GenESysV: a fast, intuitive and scalable genome exploration open source tool for variants generated from high-throughput sequencing projects
Springer Nature
2019
High-throughput sequencing
Genotyping
Genome
VCF
WGS
WES
Variants
Annotation
Mendelian diseases
Complex diseases
2019-01-31 05:00:00
Figure
https://springernature.figshare.com/articles/figure/Additional_file_5_of_GenESysV_a_fast_intuitive_and_scalable_genome_exploration_open_source_tool_for_variants_generated_from_high-throughput_sequencing_projects/7659701
Figure S2. VCF data importing times for input files with a fixed number of samples but an increasing number of variants. The VEP annotated 1000 Genomes Project Phase3 VCF file is used as input to create a series of VCF files to include the first 10, 20, 30, 40, 50, 60 and 70 million variants. These files (including the full VCF file containing the 85 million variants) are used as inputs for benchmarking data importation. See Additional file 9 for details. (TIFF 9492 kb)