10.6084/m9.figshare.7598054.v1
Rahul Rane
Rahul
Rane
Stephen Pearce
Stephen
Pearce
Fang Li
Fang
Li
Chris Coppin
Chris
Coppin
Michele Schiffer
Michele
Schiffer
Jennifer Shirriffs
Jennifer
Shirriffs
Carla Sgrò
Carla
Sgrò
Philippa C. Griffin
Philippa
C. Griffin
Goujie Zhang
Goujie
Zhang
Siu Lee
Siu
Lee
Ary Hoffmann
Ary
Hoffmann
John Oakeshott
John
Oakeshott
Additional file 2: of Genomic changes associated with adaptation to arid environments in cactophilic Drosophila species
Springer Nature
2019
Comparative genomics
Transcriptomics
Cactophilic Drosophila
Heat stress
Host adaptation
2019-01-16 05:00:00
Journal contribution
https://springernature.figshare.com/articles/journal_contribution/Additional_file_2_of_Genomic_changes_associated_with_adaptation_to_arid_environments_in_cactophilic_Drosophila_species/7598054
Figure S1. Overlap between the orthogroups generating inparalogues in the different species. Figure S2. Overlap between orthogroups belonging to genes under positive selection in each repleta group species. Figure S3. Scheme for heat stress and recovery assay. Table S1. Scaffold and contig length based statistics as well as results from BUSCO genome assessment using the dataset for the five assembled repleta group genomes and D. melanogaster. Table S2. Repeat content analysis for the six species analysed in this study, characterising transposable elements as well as tandem repeats. Table S3. Genome annotation statistics for the five assembled repleta group genomes and D. melanogaster. Table S4. Number of pairwise orthologues between D. melanogaster and the five repleta species, plus the previously published annotation of D. buzzatii. Table S5. Sets of functional terms describing hierarchical grouping of gene ontology terms and the number of genes in Drosophila melanogaster within each set. (DOCX 301 kb)