10.6084/m9.figshare.7502780.v1
Jingting Xu
Jingting
Xu
Shimeng Liu
Shimeng
Liu
Ping Yin
Ping
Yin
Serdar Bulun
Serdar
Bulun
Yang Dai
Yang
Dai
Additional file5: of MeDEStrand: an improved method to infer genome-wide absolute methylation levels from DNA enrichment data
Springer Nature
2018
DNA methylation
MeDIP-seq
RRBS
CpG bias
Sigmoid function
2018-12-22 05:00:00
Journal contribution
https://springernature.figshare.com/articles/journal_contribution/Additional_file5_of_MeDEStrand_an_improved_method_to_infer_genome-wide_absolute_methylation_levels_from_DNA_enrichment_data/7502780
Figure S1. Comparison of the methods MEDIPS_normal and MEDIPS. Pearson correlation coefficient (PCC) between MeDIP-seq and RRBS data calculated for four cell types: A GM12878; B K562; C foreskin fibroblasts; and D mammary epithelial. Y-axis shows the PCC. X-axis shows the varying parameter bin size from 25âbp to 100âbp. Boxplot illustrates the variation of PCC across the 22 chromosomes. (PDF 8 kb)