%0 Generic %A Rincón, Esther %A Rocha-Gregg, Briana %A Collins, Sean %D 2018 %T Additional file 10: of A map of gene expression in neutrophil-like cell lines %U https://springernature.figshare.com/articles/dataset/Additional_file_10_of_A_map_of_gene_expression_in_neutrophil-like_cell_lines/6891320 %R 10.6084/m9.figshare.6891320.v1 %2 https://springernature.figshare.com/ndownloader/files/12566003 %K Neutrophil-like cell line %K Differentiation protocol %K Chemotaxis %K RNA-seq %K Database %K Neutrophil %X Summary of enriched gene annotations for the set of genes upregulated in the presence of Nutridoma. This Excel file contains two sheets. The first contains a set of genes determined to be upregulated in differentiation with Nutridoma relative to differentiation with DMSO alone. This gene set was selected based on a mean log10 normalized expression value of at least − 1 across our differentiation samples, and a minimum 3-fold upregulation in each Nutridoma differentiation sample compared to its corresponding DMSO differentiation sample (for both PLB-985 and HL-60 cells). The table contains NCBI GeneIDs, Ensembl GeneIDs, gene names, and the mean log10 normalized expression values in Nutridoma and DMSO differentiation samples. Sheet 2 contains a summary of annotations enriched in for this set of upregulated genes. Annotation enrichment was calculated using the DAVID online gene annotation analysis tool [41]. (XLSX 34 kb) %I figshare