Additional file 7: Figure S1. of Enrichment allows identification of diverse, rare elements in metagenomic resistome-virulome sequencing
Noelle Noyes
Maggie Weinroth
Jennifer Parker
Chris Dean
Steven Lakin
Robert Raymond
Pablo Rovira
Enrique Doster
Zaid Abdo
Jennifer Martin
Kenneth Jones
Jaime Ruiz
Christina Boucher
Keith Belk
Paul Morley
10.6084/m9.figshare.c.3907102_D11.v1
https://springernature.figshare.com/articles/figure/Additional_file_7_Figure_S1_of_Enrichment_allows_identification_of_diverse_rare_elements_in_metagenomic_resistome-virulome_sequencing/5509177
Proportion of non-PCR amplified reads within the Resistome-UMI dataset as a linear function of (a) resistome richness at the gene level (R 2 = 0.10), (b) Simpsons diversity at the gene level (R 2 = 0.26), (c) total number of raw sequence reads (R 2 = 0.31), and (d) average NanoDrop value (R 2 = 0.006). Each dot is a sequencing library (N = 16); blue = beef, orange = poultry, red = swine, grayWWTP. (EPS 148 kb)
2017-10-17 05:00:00
Resistome
Antimicrobial resistance
Molecular enrichment
Microbial ecology
Rare microbiome