10.6084/m9.figshare.c.3870805_D5.v1
Bork Berghoff
Bork
Berghoff
Torgny Karlsson
Torgny
Karlsson
Thomas Källman
Thomas
Källman
E. Wagner
E.
Wagner
Manfred Grabherr
Manfred
Grabherr
Additional file 14: of RNA-sequence data normalization through in silico prediction of reference genes: the bacterial response to DNA damage as case study
Springer Nature
2017
RNA-seq
Transcriptomics
Normalization
Gene expression
DNA damage
Stress response
2017-09-05 05:00:00
Figure
https://springernature.figshare.com/articles/figure/Additional_file_14_of_RNA-sequence_data_normalization_through_in_silico_prediction_of_reference_genes_the_bacterial_response_to_DNA_damage_as_case_study/5374483
Correlations of gene expression changes for 19 selected genes. Log2 ratios derived from five normalization methods (RPKM, UQ, TMM, DESeq2, and moose 2 ) are compared to qRT-PCR measurements for 30-to-0-min (upper panel) and 90-to-0-min comparisons (lower panel). R, Pearsonâs rho. (TIFF 655 kb)