Additional file 8: Figure S5. of Comparative genomic analysis of innate immunity reveals novel and conserved components in crustacean food crop species Alvina Lai A. Aboobaker 10.6084/m9.figshare.c.3783407_D25.v1 https://springernature.figshare.com/articles/journal_contribution/Additional_file_8_Figure_S5_of_Comparative_genomic_analysis_of_innate_immunity_reveals_novel_and_conserved_components_in_crustacean_food_crop_species/5024234 Malacostracans Toll-like receptors (TLRs). (A) Phylogenetic tree of TLRs is constructed using the maximum-likelihood method from an amino acid multiple sequence alignment of toll-IL-1 receptor (TIR) domains. Taxa labels are depicted as their respective colour codes. Bootstrap support values (n=1000) for all trees can be found in Additional file 14: Figure S8. Scale bar represents substitution per site. (B) Graph of putative TLR transcripts. The y-axes represent total number of genes identified in all 55 malacostracan species for each family. Each species is represented by a number on the X-axes and a complete list of species is available in Additional file 3: Table S2. Black horizontal bars below each graph delimit the five orders of malacostracans and the numbers in parentheses (x/y) represent the following: x = number of species in which a particular gene family is found and y = total number of species in each order. (PDF 1124 kb) 2017-05-18 05:00:00 Malacostraca Innate immunity Evolution Crustacean Comparative genomics Arthropoda