10.6084/m9.figshare.c.3714136_D2.v1
Vincent Doublet
Vincent
Doublet
Yvonne Poeschl
Yvonne
Poeschl
Andreas Gogol-Döring
Andreas
Gogol-Döring
Cédric Alaux
Cédric
Alaux
Desiderato Annoscia
Desiderato
Annoscia
Christian Aurori
Christian
Aurori
Seth Barribeau
Seth
Barribeau
Oscar Bedoya-Reina
Oscar
Bedoya-Reina
Mark Brown
Mark
Brown
James Bull
James
Bull
Michelle Flenniken
Michelle
Flenniken
David Galbraith
David
Galbraith
Elke Genersch
Elke
Genersch
Sebastian Gisder
Sebastian
Gisder
Ivo Grosse
Ivo
Grosse
Holly Holt
Holly
Holt
Dan Hultmark
Dan
Hultmark
H. Lattorff
H.
Lattorff
Yves Le Conte
Yves
Le Conte
Fabio Manfredini
Fabio
Manfredini
Dino McMahon
Dino
McMahon
Robin Moritz
Robin
Moritz
Francesco Nazzi
Francesco
Nazzi
Elina Niño
Elina
Niño
Katja Nowick
Katja
Nowick
Ronald van Rij
Ronald
van Rij
Robert Paxton
Robert
Paxton
Christina Grozinger
Christina
Grozinger
Additional file 2: Table ST1. of Unity in defence: honeybee workers exhibit conserved molecular responses to diverse pathogens
Springer Nature
2017
Apis mellifera
Nosema
Varroa destructor
DWV
IAPV
RNA virus
Meta-analysis
Transcriptomics
Co-expression network
Immunity
2017-03-02 05:00:00
Dataset
https://springernature.figshare.com/articles/dataset/Additional_file_2_Table_ST1_of_Unity_in_defence_honeybee_workers_exhibit_conserved_molecular_responses_to_diverse_pathogens/4743175
List of 7,077 genes ordered by their rank product after the rank product analysis looking for up-regulated genes. Genes ordered from higher ranks (up-regulated) to lower ranks (non-regulated). Table ST2. List of 7,077 genes ordered by their rank product after the rank product analysis looking for down-regulated genes. Genes ordered from higher ranks (down-regulated) to lower ranks (non-regulated). Table ST3. List of 7,077 genes ordered by their rank product after the rank product analysis looking for differentially-regulated genes. Genes ordered from higher ranks (differentially-regulated) to lower ranks (non-regulated). Table ST4. List of 7,077 genes ordered by their rank product after the directed rank product analysis looking for up-regulated genes in abdominal tissue, after Nosema infection. Table ST5. List of 7,077 genes ordered by their rank product after the directed rank product analysis looking for down-regulated genes in abdominal tissue, after Nosema infection. Table ST6. Functional analysis (GO slim) based on top up-regulated genes in abdominal tissues (gut, fat body or all abdomen) upon infection by Nosema. Cut-off < 0.01 uncorrected p-value, genes from S4 Table. Table ST7. Functional analysis (GO slim) based on top down-regulated genes in abdominal tissues (gut, fat body or all abdomen) upon infection by Nosema. Cut-off < 0.01 uncorrected p-value, genes from S5 Table. Table ST8. List of 7,077 genes ordered by their rank product after the directed rank product analysis looking for up-regulated genes after RNA virus infection and Varroa infestation. Table ST9. List of 7,077 genes ordered by their rank product after the directed rank product analysis looking for down-regulated genes after RNA virus infection and Varroa infestation. Table ST10. Functional analysis (GO slim) based on top up-regulated genes upon infection by RNA virus and Varroa infestation. Cut-off < 0.01 uncorrected p-value, genes from S8 Table. Table ST11. Functional analysis (GO slim) based on top down-regulated genes upon infection by RNA virus and Varroa infestation. Cut-off < 0.01 uncorrected p-value, genes from S9 Table. Table ST12. List of the 209 highly connected (hub) genes with at least 34 inter-gene connections. Table ST13. List of genes involved in the immune gene network (Fig. 4C). Table ST14. List of immune genes used to construct the immune gene network (Fig. 4C). Table ST15. Experimental procedure and description of datasets. (XLSX 9947 kb)