Additional file 17: Table S8. of Evaluation of logistic regression models and effect of covariates for case–control study in RNA-Seq analysis
Seung Choi
Adam Labadorf
Richard Myers
Kathryn Lunetta
Josée Dupuis
Anita DeStefano
10.6084/m9.figshare.c.3684211_D16.v1
https://springernature.figshare.com/articles/journal_contribution/Additional_file_17_Table_S8_of_Evaluation_of_logistic_regression_models_and_effect_of_covariates_for_case_control_study_in_RNA-Seq_analysis/4625599
Type-I error rates of the NB regression from the balanced design with N D=1 = 10, μ D=0 = 1000, and log2fc = 0.3. Disp: Dispersion, CovOR: Odds ratios between covariates and case–control status, Ncov: The number of covariates in a model, NB: Negative binomial regression, MLD: Maximum likelihood estimated Dispersion, QLD: Quasi-likelihood estimated Dispersion, TD: The dispersion is used for the sampling. (DOCX 59 kb)
2017-02-06 05:00:00
RNA-Sequencing analysis
Firth’s logistic regression
Negative binomial regression
Covariate effect