10.6084/m9.figshare.c.3636047_D3.v1 Enoch Antwi Enoch Antwi Jurgen Haanstra Jurgen Haanstra Gowthaman Ramasamy Gowthaman Ramasamy Bryan Jensen Bryan Jensen Dorothea Droll Dorothea Droll Federico Rojas Federico Rojas Igor Minia Igor Minia Monica Terrao Monica Terrao Clémentine Mercé Clémentine Mercé Keith Matthews Keith Matthews Peter Myler Peter Myler Marilyn Parsons Marilyn Parsons Christine Clayton Christine Clayton Additional file 14: Table S2. of Integrative analysis of the Trypanosoma brucei gene expression cascade predicts differential regulation of mRNA processing and unusual control of ribosomal protein expression Springer Nature 2016 4 times BS BS-D PC UTR mRNA procyclic forms XLSX 796  kb ORF bloodstream forms PC-A Trypanosoma brucei gene expression cascade 2016-04-26 05:00:00 Dataset https://springernature.figshare.com/articles/dataset/Additional_file_14_Table_S2_of_Integrative_analysis_of_the_Trypanosoma_brucei_gene_expression_cascade_predicts_differential_regulation_of_mRNA_processing_and_unusual_control_of_ribosomal_protein_expression/4440308 Sheet 1: Results for coding regions present in both sheets 1 and 2 of Additional file 9: Table S1 are compared, using PC-A and BS-D for modelling. Column “BS ratio/PC ratio” is column M divided by column H and indicates possible developmental regulation of processing. Column O: “1. BS low”: mRNA amount is at least 4 times less than expected in bloodstream forms; “2. PC Low”: mRNA amount is at least 4 times less than expected in procyclic forms; 3. Both low: mRNA amount is at least 4 times less than expected in both forms; 4. Normal: remaining genes, except for “5. BS high”: mRNA amount is at least 4 times more than expected in bloodstream forms. Data for 5′-UTRs and upstream ORFs are from TritrypDB. Sheet 2: mRNAs that were at least 4 times less abundant than predicted in bloodstream forms, and more abundant than predicted procyclic forms. Sheet 3: mRNAs that were at least 4 times less abundant than predicted in both bloodstream and procyclic forms. Note that columns Q and R are not independent since each includes the mRNA abundance. Sheet 4: Statistical analyses. Sequence information was taken from from TritrypDB. (XLSX 796 kb)