10.6084/m9.figshare.c.3620486_D3.v1 Yan-Cong Zhang Yan-Cong Zhang Yan Zhang Yan Zhang Bi-Ru Zhu Bi-Ru Zhu Bo-Wen Zhang Bo-Wen Zhang Chuan Ni Chuan Ni Da-Yong Zhang Da-Yong Zhang Ying Huang Ying Huang Erli Pang Erli Pang Kui Lin Kui Lin Additional file 1: of Genome sequences of two closely related strains of Escherichia coli K-12 GM4792 Springer Nature 2015 Escherichia coli K12 GM4792 Lactose Gram-negative Genome comparison Experimental evolution Variant analysis 2015-12-10 05:00:00 Journal contribution https://springernature.figshare.com/articles/journal_contribution/Additional_file_1_of_Genome_sequences_of_two_closely_related_strains_of_Escherichia_coli_K-12_GM4792/4392596 Supplementary Tables and Figures. Table S1. Genomic differences between E. coli GM4792 Lac+ and Lac- detected via reads mapping with breseq pipeline. Table S2. Structural variations (insertions, deletions) of GM4792 Lac+ compared to MG1655 obtained with Mauve. Table S3. Structural variations (insertions, deletions) of GM4792 Lac- compared to MG1655 obtained with Mauve. Table S4. Nonsynonymous changes in protein sequence of GM4792 Lac+ compared to MG1655 obtained with Mauve. Table S5. Nonsynonymous changes in protein sequence of GM4792 Lac- compared to MG1655 obtained with Mauve. Table S6. 45 complete genomes used in this study. Table S7. The complete set of input parameters used for programs. Figure S1. Scanning-electron micrograph of strain E. coli GM4792 Lac-. Figure S2. Phylogenetic tree inferred from the supermatrix of proteome sequences under the Maximum-likelihood (ML) criterion. Figure S3. Graphical circular map of the chromosome of Escherichia coli K-12 GM4792 Lac-. Figure S4. Mutations related to lactose utilization. (PDF 4042 kb)