10.6084/m9.figshare.c.3620486_D3.v1
Yan-Cong Zhang
Yan-Cong
Zhang
Yan Zhang
Yan
Zhang
Bi-Ru Zhu
Bi-Ru
Zhu
Bo-Wen Zhang
Bo-Wen
Zhang
Chuan Ni
Chuan
Ni
Da-Yong Zhang
Da-Yong
Zhang
Ying Huang
Ying
Huang
Erli Pang
Erli
Pang
Kui Lin
Kui
Lin
Additional file 1: of Genome sequences of two closely related strains of Escherichia coli K-12 GM4792
Springer Nature
2015
Escherichia coli K12
GM4792
Lactose
Gram-negative
Genome comparison
Experimental evolution
Variant analysis
2015-12-10 05:00:00
Journal contribution
https://springernature.figshare.com/articles/journal_contribution/Additional_file_1_of_Genome_sequences_of_two_closely_related_strains_of_Escherichia_coli_K-12_GM4792/4392596
Supplementary Tables and Figures. Table S1. Genomic differences between E. coli GM4792 Lac+ and Lac- detected via reads mapping with breseq pipeline. Table S2. Structural variations (insertions, deletions) of GM4792 Lac+ compared to MG1655 obtained with Mauve. Table S3. Structural variations (insertions, deletions) of GM4792 Lac- compared to MG1655 obtained with Mauve. Table S4. Nonsynonymous changes in protein sequence of GM4792 Lac+ compared to MG1655 obtained with Mauve. Table S5. Nonsynonymous changes in protein sequence of GM4792 Lac- compared to MG1655 obtained with Mauve. Table S6. 45 complete genomes used in this study. Table S7. The complete set of input parameters used for programs. Figure S1. Scanning-electron micrograph of strain E. coli GM4792 Lac-. Figure S2. Phylogenetic tree inferred from the supermatrix of proteome sequences under the Maximum-likelihood (ML) criterion. Figure S3. Graphical circular map of the chromosome of Escherichia coli K-12 GM4792 Lac-. Figure S4. Mutations related to lactose utilization. (PDF 4042Â kb)