Additional file 1 of Benchmarking hybrid assemblies of Giardia and prediction of widespread intra-isolate structural variation PolloStephen ReilingSarah WitJanneke WorkentineMatthew GuyRebecca BatoffG. YeeJanet DixonBrent WasmuthJames 2020 Additional file 1: Text S1. Plaintext of commands used in analyses.